C. elegans ncRNAs: pre-miRNA

All sequences in [GFF], [FASTA].

Name Source WS130 Location WS130 feature Pseudogene GenBank References
pre-mir-50 miRNA_Registry5.0 I:1738651..1738714 Lau(2001), Lim(2003)
pre-mir-353 miRNA_Registry5.0 I:4585907..4585977 Ohler(2004)
pre-mir-244 miRNA_Registry5.0 I:4684400..4684337 Lim(2003)
pre-mir-235 miRNA_Registry5.0 I:6170504..6170441 Lim(2003), Ambros(2003)
pre-mir-1 miRNA_Registry5.0 I:6180872..6180812 Lau(2001), Lee(2001), Lagos-Quintana(2001), Lim(2003), Ambros(2003), Grad(2003)
pre-mir-245 miRNA_Registry5.0 I:7895516..7895578 Lim(2003)
pre-mir-79 miRNA_Registry5.0 I:9341087..9341150 Lau(2001), Lim(2003), Ambros(2003), Grad(2003)
pre-mir-2 miRNA_Registry5.0 I:9380970..9380906 Lau(2001), Lee(2001), Lim(2003), Ambros(2003), Grad(2003)
pre-mir-71 miRNA_Registry5.0 I:9388128..9388070 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-354 miRNA_Registry5.0 I:14476588..14476510 Ohler(2004)
pre-mir-72 miRNA_Registry5.0 II:2452855..2452920 Lau(2001), Lee(2001), Lim(2003), Ambros(2003)
pre-mir-260 miRNA_Registry5.0 II:3306247..3306317 Ambros(2003)
pre-lin-4 miRNA_Registry5.0 II:5902232..5902291 Lau(2001), Olsen(1999), Lim(2003), Ambros(2003)
pre-mir-261 miRNA_Registry5.0 II:5969049..5969101 Ambros(2003)
pre-mir-60 miRNA_Registry5.0 II:6328725..6328664 Lau(2001), Lee(2001), Lim(2003), Ambros(2003)
pre-mir-236 miRNA_Registry5.0 II:7030190..7030126 Lim(2003), Ambros(2003), Grad(2003)
pre-mir-57 miRNA_Registry5.0 II:7850503..7850443 Lau(2001), Lim(2003)
pre-mir-85 miRNA_Registry5.0 II:8393497..8393562 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-252 miRNA_Registry5.0 II:11446844..11446783 Lim(2003)
pre-mir-35 miRNA_Registry5.0 II:11537534..11537594 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-36 miRNA_Registry5.0 II:11537637..11537699 Lau(2001), Lim(2003)
pre-mir-37 miRNA_Registry5.0 II:11537759..11537819 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-38 miRNA_Registry5.0 II:11537854..11537916 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-39 miRNA_Registry5.0 II:11538008..11538069 Lau(2001), Lim(2003)
pre-mir-40 miRNA_Registry5.0 II:11538104..11538165 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-41 miRNA_Registry5.0 II:11538229..11538294 Lau(2001), Lim(2003)
pre-mir-355 miRNA_Registry5.0 II:11833528..11833469 Ohler(2004)
pre-mir-45 miRNA_Registry5.0 II:11880929..11880863 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-42 miRNA_Registry5.0 II:11889728..11889794 Lau(2001), Lee(2001), Lim(2003), Ambros(2003)
pre-mir-43 miRNA_Registry5.0 II:11889834..11889896 Lau(2001), Lee(2001), Lim(2003), Ambros(2003)
pre-mir-44 miRNA_Registry5.0 II:11889942..11890007 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-77 miRNA_Registry5.0 II:12519194..12519253 Lau(2001), Lim(2003)
pre-mir-267 miRNA_Registry5.0 II:12638111..12638049 Grad(2003)
pre-mir-234 miRNA_Registry5.0 II:14466234..14466169 Lim(2003), Ambros(2003)
pre-mir-273 miRNA_Registry5.0 II:14946946..14947006 Grad(2003)
pre-mir-229 miRNA_Registry5.0 III:2172447..2172549 Lim(2003), Ambros(2003)
pre-mir-64 miRNA_Registry5.0 III:2172857..2172924 Lau(2001), Lim(2003)
pre-mir-65 miRNA_Registry5.0 III:2173007..2173068 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-66 miRNA_Registry5.0 III:2173112..2173176 Lau(2001), Lim(2003)
pre-mir-76 miRNA_Registry5.0 III:3142050..3142116 Lau(2001), Lim(2003)
pre-mir-67 miRNA_Registry5.0 III:5931377..5931313 Lau(2001), Lim(2003)
pre-mir-231 miRNA_Registry5.0 III:7545057..7544991 Lim(2003), Ambros(2003)
pre-mir-356 miRNA_Registry5.0 III:7860093..7860154 Ohler(2004)
pre-mir-80 miRNA_Registry5.0 III:8865251..8865187 Lau(2001), Lee(2001), Ambros(2003), Lim(2003)
pre-mir-238 miRNA_Registry5.0 III:8867312..8867245 Lim(2003), Ambros(2003)
pre-mir-90 miRNA_Registry5.0 III:8873970..8873904 Lee(2001), Lim(2003), Ambros(2003)
pre-mir-272 miRNA_Registry5.0 III:11637932..11637853 Grad(2003)
pre-mir-86 miRNA_Registry5.0 III:11936595..11936531 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-46 miRNA_Registry5.0 III:13660045..13660112 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-269 miRNA_Registry5.0 IV:273912..273983 Grad(2003)
pre-mir-69 miRNA_Registry5.0 IV:1646787..1646849 Lau(2001)
pre-mir-58 miRNA_Registry5.0 IV:3233265..3233331 Lau(2001), Lee(2001), Lim(2003), Ambros(2003)
pre-mir-270 miRNA_Registry5.0 IV:3258532..3258463 Grad(2003)
pre-mir-242 miRNA_Registry5.0 IV:4274255..4274313 Lim(2003)
pre-mir-243 miRNA_Registry5.0 IV:4450791..4450854 Lim(2003)
pre-mir-228 miRNA_Registry5.0 IV:5562027..5562090 Lim(2003), Ambros(2003), Grad(2003)
pre-mir-83 miRNA_Registry5.0 IV:7841630..7841695 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-246 miRNA_Registry5.0 IV:10940122..10940185 Lim(2003)
pre-mir-232 miRNA_Registry5.0 IV:10994218..10994154 Lim(2003), Ambros(2003)
pre-mir-51 miRNA_Registry5.0 IV:11026066..11026005 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-53 miRNA_Registry5.0 IV:11027646..11027584 Lau(2001), Lim(2003)
pre-mir-59 miRNA_Registry5.0 IV:11309205..11309140 Lau(2001), Lim(2003)
pre-mir-124 miRNA_Registry5.0 IV:11871725..11871788 Lim(2003), Ambros(2003)
pre-mir-265 miRNA_Registry5.0 IV:12740489..12740421 Grad(2003)
pre-mir-52 miRNA_Registry5.0 IV:14033993..14034055 Lau(2001), Lee(2001), Lim(2003), Ambros(2003)
pre-mir-78 miRNA_Registry5.0 IV:15165638..15165689 Lau(2001), Lim(2003)
pre-mir-68 miRNA_Registry5.0 IV:16717291..16717359 Lau(2001)
pre-mir-255 miRNA_Registry5.0 V:5440451..5440560 Lim(2003)
pre-mir-253 miRNA_Registry5.0 V:5783183..5783133 Lim(2003)
pre-mir-70 miRNA_Registry5.0 V:6668205..6668146 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-256 miRNA_Registry5.0 V:6958726..6958651 Ambros(2003), Lim(2003)
pre-mir-357 miRNA_Registry5.0 V:8583213..8583155 Ohler(2004)
pre-mir-358 miRNA_Registry5.0 V:8583533..8583471 Ohler(2004)
pre-mir-259 miRNA_Registry5.0 V:10541688..10541627 Ambros(2003), Ohler(2004)
pre-lsy-6 miRNA_Registry5.0 V:10649821..10649884 Johnston(2003), Ohler(2004)
pre-mir-268 miRNA_Registry5.0 V:11139715..11139779 Grad(2003)
pre-mir-250 miRNA_Registry5.0 V:11772590..11772522 Lim(2003)
pre-mir-61 miRNA_Registry5.0 V:11772723..11772663 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-87 miRNA_Registry5.0 V:12041352..12041290 Lee(2001), Lim(2003), Ambros(2003)
pre-mir-48 miRNA_Registry5.0 V:14367082..14367023 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-241 miRNA_Registry5.0 V:14368856..14368791 Lim(2003)
pre-mir-257 miRNA_Registry5.0 V:17143261..17143346 Ambros(2003)
pre-mir-262 miRNA_Registry5.0 V:18739286..18739349 Ambros(2003)
pre-mir-258 miRNA_Registry5.0 X:227958..228047 Ambros(2003)
pre-mir-258 miRNA_Registry5.0 X:237374..237463 Ambros(2003)
pre-mir-248 miRNA_Registry5.0 X:2262441..2262381 Lim(2003)
pre-mir-73 miRNA_Registry5.0 X:2368780..2368841 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-74 miRNA_Registry5.0 X:2369055..2369117 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-75 miRNA_Registry5.0 X:2372469..2372528 Lau(2001), Lim(2003)
pre-mir-81 miRNA_Registry5.0 X:2431090..2431153 Lau(2001), Lee(2001), Lim(2003), Ambros(2003)
pre-mir-82 miRNA_Registry5.0 X:2435327..2435267 Lau(2001), Lim(2003)
pre-mir-264 miRNA_Registry5.0 X:2819262..2819325 Grad(2003)
pre-mir-34 miRNA_Registry5.0 X:2969824..2969767 Lau(2001), Lim(2003), Ambros(2003), Grad(2003)
pre-mir-359 miRNA_Registry5.0 X:3004304..3004363 Ohler(2004)
pre-mir-249 miRNA_Registry5.0 X:3006508..3006446 Lim(2003)
pre-mir-271 miRNA_Registry5.0 X:3412014..3412065 Grad(2003)
pre-mir-266 miRNA_Registry5.0 X:3755156..3755207 Grad(2003)
pre-mir-247 miRNA_Registry5.0 X:4756958..4757021 Lim(2003)
pre-mir-230 miRNA_Registry5.0 X:5803866..5803932 Lim(2003), Ambros(2003)
pre-mir-360 miRNA_Registry5.0 X:5919134..5919191 Ohler(2004)
pre-mir-240 miRNA_Registry5.0 X:7882585..7882645 Lim(2003)
pre-mir-237 miRNA_Registry5.0 X:8154039..8154097 Lim(2003), Ambros(2003)
pre-mir-49 miRNA_Registry5.0 X:9989233..9989294 Lau(2001), Lim(2003)
pre-mir-251 miRNA_Registry5.0 X:11004669..11004729 Lim(2003)
pre-mir-254 miRNA_Registry5.0 X:11333537..11333475 Lim(2003)
pre-mir-239b miRNA_Registry5.0 X:11791305..11791244 Lim(2003), Ohler(2004)
pre-mir-239a miRNA_Registry5.0 X:11792382..11792446 Lim(2003), Ambros(2003)
pre-mir-233 miRNA_Registry5.0 X:12078588..12078524 Lim(2003), Ambros(2003)
pre-mir-62 miRNA_Registry5.0 X:12692526..12692583 Lau(2001), Lee(2001), Lim(2003)
pre-mir-56 miRNA_Registry5.0 X:13144690..13144626 Lau(2001), Lim(2003), Ambros(2003), Grad(2003)
pre-mir-55 miRNA_Registry5.0 X:13144822..13144762 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-54 miRNA_Registry5.0 X:13144996..13144931 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-392 miRNA_Registry5.0 X:13597181..13597239 Ohler(2004)
pre-mir-47 miRNA_Registry5.0 X:13921190..13921253 Lau(2001), Lim(2003), Ambros(2003), Grad(2003)
pre-let-7 miRNA_Registry5.0 X:14744174..14744110 Lau(2001), Lim(2003), Ambros(2003), Grad(2003)
pre-mir-84 miRNA_Registry5.0 X:16022386..16022326 Lau(2001), Lim(2003), Ambros(2003)
pre-mir-63 miRNA_Registry5.0 X:17598759..17598695 Lau(2001), Lim(2003)