C. elegans ncRNAs: miRNA

All sequences in [GFF], [FASTA].

Name Source WS130 Location WS130 feature Pseudogene GenBank References
mir-50 miRNA_Registry5.0 I:1738651..1738674 Y71G12B.29 CEL487574 Lau(2001), Lim(2003)
mir-353 miRNA_Registry5.0 I:4585907..4585927 D1007.17 AF003151 Ohler(2004)
mir-244 miRNA_Registry5.0 I:4684400..4684377 T04D1.5 AY390750 Lim(2003)
mir-235 miRNA_Registry5.0 I:6170462..6170441 T09B4.12 AY390740 Lim(2003), Ambros(2003)
mir-1 miRNA_Registry5.0 I:6180832..6180812 C29E6.7 CEL487556 Lau(2001), Lee(2001), Lagos-Quintana(2001), Lim(2003), Ambros(2003), Grad(2003)
mir-245 miRNA_Registry5.0 I:7895557..7895578 F55D12.7 AY390751 Lim(2003)
mir-79 miRNA_Registry5.0 I:9341129..9341150 C12C8.4 CEL487602 Lau(2001), Lim(2003), Ambros(2003), Grad(2003)
mir-2 miRNA_Registry5.0 I:9380928..9380906 AC8.8 CEL487557 Lau(2001), Lee(2001), Lim(2003), Ambros(2003), Grad(2003)
mir-71 miRNA_Registry5.0 I:9388128..9388110 F16A11.4 CEL487594 Lau(2001), Lim(2003), Ambros(2003)
mir-354 miRNA_Registry5.0 I:14476530..14476510 Y105E8A.31 AL132876 Ohler(2004)
mir-72 miRNA_Registry5.0 II:2452855..2452874 F53G2.9 CEL487595 Lau(2001), Lee(2001), Lim(2003), Ambros(2003)
mir-260 miRNA_Registry5.0 II:3306298..3306317 F39E9.13 AF024501 Ambros(2003)
lin-4 miRNA_Registry5.0 II:5902232..5902252 F59G1.6 NR_000799 Lau(2001), Olsen(1999), Lim(2003), Ambros(2003)
mir-261 miRNA_Registry5.0 II:5969083..5969101 B0034.6 U23528 Ambros(2003)
mir-60 miRNA_Registry5.0 II:6328686..6328664 C32D5.13 CEL487584 Lau(2001), Lee(2001), Lim(2003), Ambros(2003)
mir-236 miRNA_Registry5.0 II:7030148..7030126 C52E12.7 AY390741 Lim(2003), Ambros(2003), Grad(2003)
mir-57 miRNA_Registry5.0 II:7850503..7850480 T09A5.13 CEL487581 Lau(2001), Lim(2003)
mir-85 miRNA_Registry5.0 II:8393539..8393562 F49E12.11 CEL487608 Lau(2001), Lim(2003), Ambros(2003)
mir-252 miRNA_Registry5.0 II:11446844..11446822 W02B12.14 AY390758 Lim(2003)
mir-35 miRNA_Registry5.0 II:11537573..11537594 D1007.17 CEL487559 Lau(2001), Lim(2003), Ambros(2003)
mir-36 miRNA_Registry5.0 II:11537678..11537699 Y23B4A.3 CEL487560 Lau(2001), Lim(2003)
mir-37 miRNA_Registry5.0 II:11537798..11537819 Y62F5A.4 CEL487561 Lau(2001), Lim(2003), Ambros(2003)
mir-38 miRNA_Registry5.0 II:11537895..11537916 Y62F5A.5 CEL487562 Lau(2001), Lim(2003), Ambros(2003)
mir-39 miRNA_Registry5.0 II:11538048..11538069 F54B11.12 CEL487564 Lau(2001), Lim(2003)
mir-40 miRNA_Registry5.0 II:11538144..11538165 Y62F5A.7 CEL487565 Lau(2001), Lim(2003), Ambros(2003)
mir-41 miRNA_Registry5.0 II:11538273..11538294 Y62F5A.8 CEL487563 Lau(2001), Lim(2003)
mir-355 miRNA_Registry5.0 II:11833528..11833508 T27D12.5 Z70037 Ohler(2004)
mir-45 miRNA_Registry5.0 II:11880883..11880863 ZK930.11 CEL487569 Lau(2001), Lim(2003), Ambros(2003)
mir-42 miRNA_Registry5.0 II:11889775..11889794 ZK930.8 CEL487566 Lau(2001), Lee(2001), Lim(2003), Ambros(2003)
mir-43 miRNA_Registry5.0 II:11889874..11889896 ZK930.9 CEL487567 Lau(2001), Lee(2001), Lim(2003), Ambros(2003)
mir-44 miRNA_Registry5.0 II:11889987..11890007 ZK930.10 CEL487568 Lau(2001), Lim(2003), Ambros(2003)
mir-77 miRNA_Registry5.0 II:12519232..12519253 T21B4.13 CEL487600 Lau(2001), Lim(2003)
mir-267 miRNA_Registry5.0 II:12638111..12638092 Y38E10A.27 AL110484 Grad(2003)
mir-234 miRNA_Registry5.0 II:14466189..14466169 C13B4.3 AY390739 Lim(2003), Ambros(2003)
mir-273 miRNA_Registry5.0 II:14946987..14947006 E01F3.2 Z93376 Grad(2003)
mir-229 miRNA_Registry5.0 III:2172447..2172473 Y48G9A.16 AY390734 Lim(2003), Ambros(2003)
mir-64 miRNA_Registry5.0 III:2172857..2172879 Y48G9A.13 CEL487588 Lau(2001), Lim(2003)
mir-65 miRNA_Registry5.0 III:2173007..2173029 Y48G9A.14 CEL487589 Lau(2001), Lim(2003), Ambros(2003)
mir-66 miRNA_Registry5.0 III:2173112..2173134 Y48G9A.15 CEL487590 Lau(2001), Lim(2003)
mir-76 miRNA_Registry5.0 III:3142095..3142116 C44B11.5 CEL487599 Lau(2001), Lim(2003)
mir-67 miRNA_Registry5.0 III:5931336..5931313 EGAP1.2 CEL487591 Lau(2001), Lim(2003)
mir-231 miRNA_Registry5.0 III:7545014..7544991 R13A5.14 AY390736 Lim(2003), Ambros(2003)
mir-356 miRNA_Registry5.0 III:7860093..7860113 ZK652.12 L14429 Ohler(2004)
mir-80 miRNA_Registry5.0 III:8865209..8865187 K01F9.3 CEL487603 Lau(2001), Lee(2001), Ambros(2003), Lim(2003)
mir-227 miRNA_Registry5.0 III:8865251..8865230 K01F9.4 Z22175 Lau(2001), Lee(2001), Ambros(2003), Lim(2003)
mir-238 miRNA_Registry5.0 III:8867267..8867245 K01F9.5 AY390743 Lim(2003), Ambros(2003)
mir-90 miRNA_Registry5.0 III:8873925..8873904 K01F9.1 CEL487610 Lee(2001), Lim(2003), Ambros(2003)
mir-272 miRNA_Registry5.0 III:11637870..11637853 Y41C4A.20 AL032627 Grad(2003)
mir-86 miRNA_Registry5.0 III:11936595..11936573 Y56A3A.34 CEL487609 Lau(2001), Lim(2003), Ambros(2003)
mir-46 miRNA_Registry5.0 III:13660091..13660112 ZK525.3 CEL487570 Lau(2001), Lim(2003), Ambros(2003)
mir-269 miRNA_Registry5.0 IV:273912..273931 T21D12.13 AF016687 Grad(2003)
mir-69 miRNA_Registry5.0 IV:1646829..1646849 Y41D4B.25 NR_000452 Lau(2001)
mir-58 miRNA_Registry5.0 IV:3233310..3233331 Y67D8A.4 CEL487582 Lau(2001), Lee(2001), Lim(2003), Ambros(2003)
mir-270 miRNA_Registry5.0 IV:3258482..3258463 T26C12.5 AF067623 Grad(2003)
mir-242 miRNA_Registry5.0 IV:4274255..4274275 F36A4.16 AY390748 Lim(2003)
mir-243 miRNA_Registry5.0 IV:4450832..4450854 R08C7.14 AY390749 Lim(2003)
mir-228 miRNA_Registry5.0 IV:5562027..5562049 T12E12.7 AY390733 Lim(2003), Ambros(2003), Grad(2003)
mir-83 miRNA_Registry5.0 IV:7841674..7841695 C06A6.6 CEL487606 Lau(2001), Lim(2003), Ambros(2003)
mir-246 miRNA_Registry5.0 IV:10940164..10940185 ZK593.10 AY390752 Lim(2003)
mir-232 miRNA_Registry5.0 IV:10994176..10994154 F13H10.7 AY390737 Lim(2003), Ambros(2003)
mir-51 miRNA_Registry5.0 IV:11026066..11026044 F36H1.7 CEL487575 Lau(2001), Lim(2003), Ambros(2003)
mir-53 miRNA_Registry5.0 IV:11027646..11027623 F36H1.8 CEL487577 Lau(2001), Lim(2003)
mir-59 miRNA_Registry5.0 IV:11309162..11309140 B0035.17 CEL487583 Lau(2001), Lim(2003)
mir-124 miRNA_Registry5.0 IV:11871768..11871788 C29E6.7 AY390732 Lim(2003), Ambros(2003)
mir-265 miRNA_Registry5.0 IV:12740440..12740421 T23F6.6 Z83127 Grad(2003)
mir-52 miRNA_Registry5.0 IV:14033993..14034016 Y37A1B.16 CEL487576 Lau(2001), Lee(2001), Lim(2003), Ambros(2003)
mir-78 miRNA_Registry5.0 IV:15165669..15165689 Y40H7A.12 CEL487601 Lau(2001), Lim(2003)
mir-68 miRNA_Registry5.0 IV:16717339..16717359 Y51H4A.27 NR_000453 Lau(2001)
mir-253 miRNA_Registry5.0 V:5783183..5783163 F44E7.11 AY390759 Lim(2003)
mir-70 miRNA_Registry5.0 V:6668168..6668146 T10H9.7 CEL487593 Lau(2001), Lim(2003), Ambros(2003)
mir-256 miRNA_Registry5.0 V:6958671..6958651 T07H8.8 AF067945 Ambros(2003), Lim(2003)
mir-357 miRNA_Registry5.0 V:8583175..8583155 F25G6.10 AF022973 Ohler(2004)
mir-358 miRNA_Registry5.0 V:8583491..8583471 F25G6.11 AF022973 Ohler(2004)
mir-259 miRNA_Registry5.0 V:10541688..10541668 F25D1.6 Z73973 Ambros(2003), Ohler(2004)
lsy-6 miRNA_Registry5.0 V:10649864..10649884 C32C4.6 Z73905 Johnston(2003), Ohler(2004)
mir-268 miRNA_Registry5.0 V:11139715..11139738 C06H2.8 Z75526 Grad(2003)
mir-250 miRNA_Registry5.0 V:11772543..11772522 F55A11.12 AY390756 Lim(2003)
mir-61 miRNA_Registry5.0 V:11772685..11772663 F55A11.9 CEL487585 Lau(2001), Lim(2003), Ambros(2003)
mir-87 miRNA_Registry5.0 V:12041309..12041290 F10C2.8 NR_000797 Lee(2001), Lim(2003), Ambros(2003)
mir-48 miRNA_Registry5.0 V:14367082..14367060 F56A12.3 CEL487572 Lau(2001), Lim(2003), Ambros(2003)
mir-241 miRNA_Registry5.0 V:14368856..14368836 F56A12.4 AY390747 Lim(2003)
mir-257 miRNA_Registry5.0 V:17143261..17143282 Y102A5D.4 AL031628 Ambros(2003)
mir-262 miRNA_Registry5.0 V:18739330..18739349 ZK384.5 Z82092 Ambros(2003)
mir-258 miRNA_Registry5.0 X:227958..227978 AC8.8 Z83097 Ambros(2003)
mir-258 miRNA_Registry5.0 X:237374..237394 AC8.8 Z83097 Ambros(2003)
mir-248 miRNA_Registry5.0 X:2262403..2262381 AH9.5 AY390754 Lim(2003)
mir-73 miRNA_Registry5.0 X:2368819..2368841 T24D8.9 CEL487596 Lau(2001), Lim(2003), Ambros(2003)
mir-74 miRNA_Registry5.0 X:2369096..2369117 T24D8.7 CEL487597 Lau(2001), Lim(2003), Ambros(2003)
mir-75 miRNA_Registry5.0 X:2372507..2372528 T24D8.8 CEL487598 Lau(2001), Lim(2003)
mir-81 miRNA_Registry5.0 X:2431132..2431153 T07D1.6 CEL487604 Lau(2001), Lee(2001), Lim(2003), Ambros(2003)
mir-82 miRNA_Registry5.0 X:2435288..2435267 T07D1.7 CEL487605 Lau(2001), Lim(2003)
mir-264 miRNA_Registry5.0 X:2819306..2819325 C14A11.8 U97592 Grad(2003)
mir-34 miRNA_Registry5.0 X:2969824..2969803 Y41G9A.7 CEL487558 Lau(2001), Lim(2003), Ambros(2003), Grad(2003)
mir-359 miRNA_Registry5.0 X:3004343..3004363 Y41G9A.9 AC006761 Ohler(2004)
mir-249 miRNA_Registry5.0 X:3006467..3006446 Y48D7A.3 AY390755 Lim(2003)
mir-271 miRNA_Registry5.0 X:3412014..3412033 C04F6.6 U42835 Grad(2003)
mir-266 miRNA_Registry5.0 X:3755156..3755175 T14G12.7 U41268 Grad(2003)
mir-247 miRNA_Registry5.0 X:4756999..4757021 C39E6.7 AY390753 Lim(2003)
mir-230 miRNA_Registry5.0 X:5803910..5803932 F46G11.5 AY390735 Lim(2003), Ambros(2003)
mir-360 miRNA_Registry5.0 X:5919171..5919191 Y23B4A.3 AC006726 Ohler(2004)
mir-240 miRNA_Registry5.0 X:7882624..7882645 C39D10.10 AY390746 Lim(2003)
mir-237 miRNA_Registry5.0 X:8154039..8154062 F22F1.4 AY390742 Lim(2003), Ambros(2003)
mir-49 miRNA_Registry5.0 X:9989273..9989294 F19C6.6 CEL487573 Lau(2001), Lim(2003)
mir-251 miRNA_Registry5.0 X:11004669..11004692 F59F3.7 AY390757 Lim(2003)
mir-254 miRNA_Registry5.0 X:11333497..11333475 ZK455.9 AY390760 Lim(2003)
mir-239b miRNA_Registry5.0 X:11791305..11791285 C34E11.6 AY390745 Lim(2003), Ohler(2004)
mir-239a miRNA_Registry5.0 X:11792382..11792404 C34E11.5 AY390744 Lim(2003), Ambros(2003)
mir-233 miRNA_Registry5.0 X:12078546..12078524 W03G11.5 AY390738 Lim(2003), Ambros(2003)
mir-62 miRNA_Registry5.0 X:12692562..12692583 T07C5.6 CEL487586 Lau(2001), Lee(2001), Lim(2003)
mir-56 miRNA_Registry5.0 X:13144647..13144626 F09A5.7 CEL487580 Lau(2001), Lim(2003), Ambros(2003), Grad(2003)
mir-55 miRNA_Registry5.0 X:13144784..13144762 F09A5.6 CEL487579 Lau(2001), Lim(2003), Ambros(2003)
mir-54 miRNA_Registry5.0 X:13144954..13144931 F09A5.5 CEL487578 Lau(2001), Lim(2003), Ambros(2003)
mir-392 miRNA_Registry5.0 X:13597218..13597239 F54B11.12 Z70208 Ohler(2004)
mir-47 miRNA_Registry5.0 X:13921232..13921253 K02B9.5 CEL487571 Lau(2001), Lim(2003), Ambros(2003), Grad(2003)
let-7 miRNA_Registry5.0 X:14744174..14744153 C05G5.6 NR_000938 Lau(2001), Lim(2003), Ambros(2003), Grad(2003)
mir-84 miRNA_Registry5.0 X:16022386..16022365 B0395.4 CEL487607 Lau(2001), Lim(2003), Ambros(2003)
mir-63 miRNA_Registry5.0 X:17598718..17598695 C16H3.5 CEL487587 Lau(2001), Lim(2003)