| Name |
Source |
WS130 Location |
WS130 feature |
Pseudogene |
GenBank |
References |
|
sn2417
|
predicted |
I:3904..3782 |
Y74C9A.6
|
|
NR_001477
|
Higa(2002)
|
|
cer-3
|
curated |
I:111291..111417 |
F53G12.12
|
|
AB125752
|
Wachi(2004)
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
I:185335..185409 |
F56C11.t1
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:196922..196991 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:206098..206167 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:400692..400620 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:414550..414478 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:475622..475552 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:596726..596796 |
|
Probable
|
|
|
|
tRNA-Leu-CAG
|
tRNAscan-SE-1.23 |
I:754682..754765 |
Y18H1A.t1
|
|
NR_000062
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
I:803802..803874 |
ZC123.t1
|
Probable
|
|
|
|
tRNA-Trp-CCA
|
tRNAscan-SE-1.23 |
I:946117..946046 |
Y95B8A.t1
|
|
NR_000064
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:997299..997362 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:1410063..1409991 |
|
Probable
|
|
|
|
tRNA-Arg-UCU
|
tRNAscan-SE-1.23 |
I:1447139..1447211 |
F47G6.t1
|
|
NR_000065
|
|
|
tRNA-Arg-UCU
|
tRNAscan-SE-1.23 |
I:1575721..1575793 |
Y92H12A.t1
|
|
NR_000066
|
|
|
mir-50
|
miRNA_Registry5.0 |
I:1738651..1738674 |
Y71G12B.29
|
|
CEL487574
|
Lau(2001),
Lim(2003)
|
|
pre-mir-50
|
miRNA_Registry5.0 |
I:1738651..1738714 |
|
|
|
Lau(2001),
Lim(2003)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:1808799..1808729 |
|
Probable
|
|
|
|
tncR22
|
curated |
I:2149893..2149913 |
|
|
|
Ambros(2003)
|
|
tncR18
|
curated |
I:2149989..2150006 |
|
|
|
Ambros(2003)
|
|
tncR16
|
curated |
I:2150221..2150241 |
|
|
|
Ambros(2003)
|
|
tRNA-Gly-GCC
|
tRNAscan-SE-1.23 |
I:2272439..2272369 |
Y39G10AL.t1
|
|
NR_000067
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:2636242..2636314 |
|
Probable
|
|
|
|
U5
|
WUBLAST2.0 |
I:2688948..2689070 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:2772498..2772567 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:3367248..3367179 |
|
Probable
|
|
|
|
tRNA-Met-CAU
|
tRNAscan-SE-1.23 |
I:3638926..3638854 |
T28F2.t1
|
|
NR_000070
|
|
|
sls-2.4
|
curated |
I:4172207..4172316 |
R12E2.16
|
|
M27263
|
Huang(1989)
|
|
mir-353
|
miRNA_Registry5.0 |
I:4585907..4585927 |
D1007.17
|
|
AF003151
|
Ohler(2004)
|
|
pre-mir-353
|
miRNA_Registry5.0 |
I:4585907..4585977 |
|
|
|
Ohler(2004)
|
|
pre-mir-244
|
miRNA_Registry5.0 |
I:4684400..4684337 |
|
|
|
Lim(2003)
|
|
mir-244
|
miRNA_Registry5.0 |
I:4684400..4684377 |
T04D1.5
|
|
AY390750
|
Lim(2003)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:4755102..4755174 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:4779944..4779880 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:5298251..5298322 |
|
Probable
|
|
|
|
tRNA-Arg-ACG
|
tRNAscan-SE-1.23 |
I:5851291..5851219 |
F33D11.t2
|
|
NR_000073
|
|
|
tRNA-Pro-AGG
|
tRNAscan-SE-1.23 |
I:5863001..5862930 |
F33D11.t1
|
|
NR_000072
|
|
|
tRNA-Leu-AAG
|
tRNAscan-SE-1.23 |
I:6059371..6059290 |
C27A12.t1
|
|
NR_000074
|
|
|
tRNA-Tyr-GUA
|
tRNAscan-SE-1.23 |
I:6143965..6144048 |
F56F4.t1
|
|
NR_000058
|
|
|
tRNA-Lys-CUU
|
tRNAscan-SE-1.23 |
I:6144732..6144804 |
F56F4.t2
|
|
NR_000075
|
|
|
mir-235
|
miRNA_Registry5.0 |
I:6170462..6170441 |
T09B4.12
|
|
AY390740
|
Lim(2003),
Ambros(2003)
|
|
pre-mir-235
|
miRNA_Registry5.0 |
I:6170504..6170441 |
|
|
|
Lim(2003),
Ambros(2003)
|
|
tRNA-Ile-AAU
|
tRNAscan-SE-1.23 |
I:6171679..6171606 |
T09B4.t2
|
|
NR_000077
|
|
|
tRNA-Ile-AAU
|
tRNAscan-SE-1.23 |
I:6172326..6172399 |
T09B4.t1
|
|
NR_000076
|
|
|
mir-1
|
miRNA_Registry5.0 |
I:6180832..6180812 |
C29E6.7
|
|
CEL487556
|
Lau(2001),
Lee(2001),
Lagos-Quintana(2001),
Lim(2003),
Ambros(2003),
Grad(2003)
|
|
pre-mir-1
|
miRNA_Registry5.0 |
I:6180872..6180812 |
|
|
|
Lau(2001),
Lee(2001),
Lagos-Quintana(2001),
Lim(2003),
Ambros(2003),
Grad(2003)
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
I:6221027..6220956 |
T08B2.t1
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:6273332..6273263 |
|
Probable
|
|
|
|
tRNA-Cys-GCA
|
tRNAscan-SE-1.23 |
I:6789937..6790008 |
C37A2.t1
|
|
NR_000078
|
|
|
U1-1
|
curated |
I:6855435..6855270 |
|
|
X51371
|
Thomas(1990)
|
|
tRNA-Lys-CUU
|
tRNAscan-SE-1.23 |
I:7287558..7287486 |
F21C3.t1
|
|
NR_000079
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:7727085..7727009 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
I:7851040..7851114 |
F30F8.t1
|
Probable
|
|
|
|
pre-mir-245
|
miRNA_Registry5.0 |
I:7895516..7895578 |
|
|
|
Lim(2003)
|
|
mir-245
|
miRNA_Registry5.0 |
I:7895557..7895578 |
F55D12.7
|
|
AY390751
|
Lim(2003)
|
|
tRNA-Ile-UAU
|
tRNAscan-SE-1.23 |
I:7968963..7969047 |
T22C1.t1
|
|
NR_000083
|
|
|
tRNA-Glu-CUC
|
tRNAscan-SE-1.23 |
I:8538324..8538253 |
K02B12.t1
|
|
NR_000059
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:8789363..8789279 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
I:8799479..8799551 |
DY3.t1
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:8961293..8961365 |
|
Probable
|
|
|
|
tRNA-Asn-GUU
|
tRNAscan-SE-1.23 |
I:9059449..9059377 |
W06D4.t1
|
|
NR_000089
|
|
|
sls-2.6
|
curated |
I:9063386..9063273 |
W06D4.7
|
|
U29490
|
Ross(1995)
|
|
sls-2.7
|
curated |
I:9066123..9066014 |
W06D4.8
|
|
U29491
|
Ross(1995)
|
|
tRNA-Arg-UCG
|
tRNAscan-SE-1.23 |
I:9275246..9275318 |
F14B4.t1
|
|
NR_000096
|
|
|
tRNA-Pro-AGG
|
tRNAscan-SE-1.23 |
I:9277123..9277052 |
F14B4.t2
|
|
NR_000097
|
|
|
tRNA-Gly-UCC
|
tRNAscan-SE-1.23 |
I:9328159..9328088 |
C12C8.t6
|
|
NR_000095
|
|
|
tRNA-Gly-UCC
|
tRNAscan-SE-1.23 |
I:9328301..9328372 |
C12C8.t1
|
|
NR_000093
|
|
|
tRNA-Gly-UCC
|
tRNAscan-SE-1.23 |
I:9335618..9335547 |
C12C8.t5
|
|
NR_000094
|
|
|
tRNA-Gly-UCC
|
tRNAscan-SE-1.23 |
I:9335760..9335831 |
C12C8.t2
|
|
NR_000090
|
|
|
tRNA-Gly-UCC
|
tRNAscan-SE-1.23 |
I:9336610..9336539 |
C12C8.t4
|
|
NR_000091
|
|
|
tRNA-Gly-UCC
|
tRNAscan-SE-1.23 |
I:9336753..9336824 |
C12C8.t3
|
|
NR_000092
|
|
|
pre-mir-79
|
miRNA_Registry5.0 |
I:9341087..9341150 |
|
|
|
Lau(2001),
Lim(2003),
Ambros(2003),
Grad(2003)
|
|
mir-79
|
miRNA_Registry5.0 |
I:9341129..9341150 |
C12C8.4
|
|
CEL487602
|
Lau(2001),
Lim(2003),
Ambros(2003),
Grad(2003)
|
|
mir-2
|
miRNA_Registry5.0 |
I:9380928..9380906 |
AC8.8
|
|
CEL487557
|
Lau(2001),
Lee(2001),
Lim(2003),
Ambros(2003),
Grad(2003)
|
|
pre-mir-2
|
miRNA_Registry5.0 |
I:9380970..9380906 |
|
|
|
Lau(2001),
Lee(2001),
Lim(2003),
Ambros(2003),
Grad(2003)
|
|
pre-mir-71
|
miRNA_Registry5.0 |
I:9388128..9388070 |
|
|
|
Lau(2001),
Lim(2003),
Ambros(2003)
|
|
mir-71
|
miRNA_Registry5.0 |
I:9388128..9388110 |
F16A11.4
|
|
CEL487594
|
Lau(2001),
Lim(2003),
Ambros(2003)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:9566915..9566997 |
|
Probable
|
|
|
|
tRNA-Ile-UAU
|
tRNAscan-SE-1.23 |
I:9570476..9570560 |
C36F7.t2
|
|
NR_000099
|
|
|
tRNA-Ile-UAU
|
tRNAscan-SE-1.23 |
I:9572050..9571966 |
C36F7.t3
|
|
NR_000100
|
|
|
tRNA-Ser-UGA
|
tRNAscan-SE-1.23 |
I:9613879..9613960 |
K07A1.t1
|
|
NR_000101
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
I:9687765..9687839 |
C04F12.t1
|
Probable
|
|
|
|
tRNA-Glu-UUC
|
tRNAscan-SE-1.23 |
I:9891817..9891888 |
T23H4.t1
|
|
NR_000103
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
I:10141792..10141722 |
Y106G6D.t1
|
Probable
|
|
|
|
U3A-1
|
curated |
I:10525283..10525100 |
|
|
|
|
|
U3A-2
|
curated |
I:10573379..10573563 |
|
|
|
|
|
tRNA-Gly-GCC
|
tRNAscan-SE-1.23 |
I:10601258..10601328 |
T22A3.t1
|
|
NR_000106
|
|
|
tRNA-Gly-CCC
|
tRNAscan-SE-1.23 |
I:10609336..10609254 |
T22A3.t4
|
|
NR_000109
|
|
|
tRNA-Gly-CCC
|
tRNAscan-SE-1.23 |
I:10609972..10610054 |
T22A3.t2
|
|
NR_000107
|
|
|
tRNA-Gly-CCC
|
tRNAscan-SE-1.23 |
I:10612337..10612255 |
T22A3.t3
|
|
NR_000108
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:10612528..10612590 |
|
Probable
|
|
|
|
U6
|
WUBLAST2.0 |
I:10732600..10732708 |
|
|
|
|
|
tRNA-Asp-GUC
|
tRNAscan-SE-1.23 |
I:10815325..10815396 |
C35E7.t1
|
|
NR_000110
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
I:10879743..10879815 |
Y37F4.t1
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
I:10880886..10880814 |
Y37F4.t2
|
Probable
|
|
|
|
tRNA-Gly-UCC
|
tRNAscan-SE-1.23 |
I:10935609..10935538 |
F49D11.t2
|
|
NR_000112
|
|
|
tRNA-Gly-UCC
|
tRNAscan-SE-1.23 |
I:10935708..10935779 |
F49D11.t1
|
|
NR_000111
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:10953946..10954018 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:11142013..11142082 |
|
Probable
|
|
|
|
tRNA-Gly-GCC
|
tRNAscan-SE-1.23 |
I:11166751..11166821 |
ZK39.t1
|
|
NR_000117
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:11247477..11247547 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:11255377..11255446 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:11257517..11257448 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:11311421..11311354 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:11318166..11318233 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:11509018..11508944 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:11511062..11511132 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:11512335..11512401 |
|
Probable
|
|
|
|
tRNA-Cys-GCA
|
tRNAscan-SE-1.23 |
I:11513674..11513745 |
F32B4.t1
|
|
NR_000121
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:11514871..11514812 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:11555809..11555871 |
|
Probable
|
|
|
|
tRNA-Lys-CUU
|
tRNAscan-SE-1.23 |
I:11587900..11587828 |
F15D3.t1
|
|
NR_000123
|
|
|
tRNA-Lys-CUU
|
tRNAscan-SE-1.23 |
I:11592316..11592244 |
C17D12.t1
|
|
Z81473
|
|
|
tRNA-Lys-CUU
|
tRNAscan-SE-1.23 |
I:11592909..11592981 |
C17D12.t2
|
|
Z81473
|
|
|
tRNA-Leu-AAG
|
tRNAscan-SE-1.23 |
I:11593573..11593492 |
C17D12.t3
|
|
Z81473
|
|
|
U2-16
|
curated |
I:11636476..11636290 |
Y47H9A.2
|
|
NR_000124
|
|
|
U2-8
|
curated |
I:11657625..11657809 |
W04G5.11
|
|
NR_000125
|
Thomas(1990)
|
|
tRNA-Ser-CGA
|
tRNAscan-SE-1.23 |
I:11811519..11811438 |
T02G6.t1
|
|
NR_000126
|
|
|
tRNA-Glu-CUC
|
tRNAscan-SE-1.23 |
I:11985384..11985313 |
Y53C10A.t3
|
|
NR_000131
|
|
|
tRNA-Glu-CUC
|
tRNAscan-SE-1.23 |
I:11986114..11986185 |
Y53C10A.t1
|
|
NR_000129
|
|
|
tRNA-Glu-CUC
|
tRNAscan-SE-1.23 |
I:11986886..11986957 |
Y53C10A.t2
|
|
NR_000130
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12007453..12007524 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12007599..12007660 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12007739..12007807 |
|
Probable
|
|
|
|
tRNA-Val-AAC
|
tRNAscan-SE-1.23 |
I:12073987..12074059 |
F58D5.t1
|
|
NR_000133
|
|
|
tRNA-Met-CAU
|
tRNAscan-SE-1.23 |
I:12151033..12151104 |
F15H9.t1
|
|
NR_000139
|
|
|
U2-13
|
curated |
I:12153105..12153291 |
F15H9.5
|
|
NR_000137
|
|
|
U2-14
|
curated |
I:12157887..12157701 |
F15H9.6
|
|
NR_000138
|
|
|
U2-15
|
curated |
I:12182033..12181847 |
R05D7.6
|
|
NR_000140
|
|
|
tRNA-Arg-UCU
|
tRNAscan-SE-1.23 |
I:12206725..12206797 |
C15C6.t1
|
|
NR_000134
|
|
|
tRNA-Met-CAU
|
tRNAscan-SE-1.23 |
I:12233619..12233548 |
F14B6.t2
|
|
NR_000136
|
|
|
tRNA-Met-CAU
|
tRNAscan-SE-1.23 |
I:12237431..12237502 |
F14B6.t1
|
|
NR_000135
|
|
|
U2-1b
|
curated |
I:12293868..12294054 |
F56H6.16
|
|
NR_000144
|
Thomas(1990)
|
|
U2-1a
|
curated |
I:12294710..12294896 |
F56H6.14
|
|
NR_000142
|
Thomas(1990)
|
|
U2-2
|
curated |
I:12296529..12296343 |
F56H6.15
|
|
NR_000143
|
Thomas(1990)
|
|
U2-11
|
curated |
I:12333066..12332880 |
C47F8.9
|
|
NR_000141
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12478657..12478719 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12482496..12482558 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12493065..12492993 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12493650..12493722 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12493989..12493919 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12494759..12494689 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12499780..12499850 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12500153..12500083 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12609899..12609966 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12618094..12618024 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12618296..12618225 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12623264..12623332 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12623810..12623741 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12625480..12625410 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12626048..12626118 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12626235..12626305 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12682678..12682603 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12682986..12682911 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12683291..12683221 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12683843..12683917 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12685659..12685729 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12686639..12686569 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12690342..12690413 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
I:12739850..12739779 |
W02A11.t1
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12741829..12741756 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12764457..12764385 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12933417..12933488 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:12934393..12934322 |
|
Probable
|
|
|
|
tRNA-Val-AAC
|
tRNAscan-SE-1.23 |
I:13164549..13164477 |
F22G12.t2
|
|
NR_000153
|
|
|
tRNA-Val-AAC
|
tRNAscan-SE-1.23 |
I:13169181..13169253 |
F22G12.t1
|
|
NR_000152
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13190952..13191019 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13191136..13191206 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13228232..13228160 |
|
Probable
|
|
|
|
tRNA-Lys-CUU
|
tRNAscan-SE-1.23 |
I:13305864..13305792 |
M01E5.t1
|
|
NR_000155
|
|
|
sls-2.9
|
curated |
I:13305996..13306104 |
M01E5.7
|
|
Z93385
|
|
|
tRNA-Thr-UGU
|
tRNAscan-SE-1.23 |
I:13318535..13318464 |
T04D3.t4
|
|
NR_000159
|
|
|
tRNA-Gly-UCC
|
tRNAscan-SE-1.23 |
I:13332370..13332299 |
T04D3.t3
|
|
NR_000158
|
|
|
tRNA-Gly-UCC
|
tRNAscan-SE-1.23 |
I:13333114..13333185 |
T04D3.t1
|
|
NR_000156
|
|
|
tRNA-Gly-UCC
|
tRNAscan-SE-1.23 |
I:13339337..13339266 |
T04D3.t2
|
|
NR_000157
|
|
|
RNaseP
|
predicted |
I:13472073..13472324 |
|
|
AF434764
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13693952..13694019 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13694105..13694175 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13694746..13694679 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13694886..13694820 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13695365..13695295 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13697132..13697200 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13697277..13697350 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13698634..13698704 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13700582..13700512 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13700726..13700659 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13701322..13701262 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13701784..13701714 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13703091..13703163 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13709630..13709566 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13709770..13709704 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13709917..13709847 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13710846..13710770 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13711610..13711544 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13711767..13711699 |
|
Probable
|
|
|
|
tncR15
|
curated |
I:13861002..13860985 |
|
|
|
Ambros(2003)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:13950586..13950656 |
|
Probable
|
|
|
|
tncR27
|
curated |
I:13965923..13965905 |
|
|
|
Ambros(2003)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14104770..14104840 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14105070..14105139 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14105369..14105439 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14106026..14106093 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14135860..14135791 |
|
Probable
|
|
|
|
tRNA-Ser-GCU
|
tRNAscan-SE-1.23 |
I:14170966..14171047 |
C37A5.t1
|
|
NR_000167
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14232790..14232857 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14235958..14236028 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14236263..14236333 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14236933..14237003 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14237164..14237234 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14238092..14238024 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14238751..14238681 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14239035..14238966 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14239649..14239719 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14239934..14240001 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14240238..14240308 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14240420..14240490 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14240963..14240893 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14241512..14241580 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14242200..14242130 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14242496..14242426 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14242934..14242998 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14243231..14243299 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14243765..14243695 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14249493..14249423 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14250924..14250859 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14251221..14251157 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14252059..14251989 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14253614..14253684 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14253931..14254001 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14256063..14255994 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14280371..14280441 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14280673..14280740 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14315465..14315534 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14330929..14330861 |
|
Probable
|
|
|
|
mir-354
|
miRNA_Registry5.0 |
I:14476530..14476510 |
Y105E8A.31
|
|
AL132876
|
Ohler(2004)
|
|
pre-mir-354
|
miRNA_Registry5.0 |
I:14476588..14476510 |
|
|
|
Ohler(2004)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14603983..14603914 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14644198..14644129 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14693564..14693492 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
I:14808487..14808559 |
|
Probable
|
|
|
|
tncR1
|
curated |
I:15058947..15058965 |
|
|
|
Ambros(2003)
|
|
18S
|
curated |
I:15070201..15071954 |
F31C3.7
|
|
X03680
|
Ellis(1986),
Consortium(1998)
|
|
5.8S
|
curated |
I:15072419..15072571 |
F31C3.11
|
|
X03680
|
Ellis(1986),
Consortium(1998)
|
|
26S
|
curated |
I:15072956..15076464 |
F31C3.9
|
|
X03680
|
Ellis(1986),
Consortium(1998)
|
|
18S
|
curated |
I:15077398..15079151 |
F31C3.8
|
|
X03680
|
Ellis(1986),
Consortium(1998)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:752058..751992 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:752180..752116 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:754427..754356 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:755151..755219 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:977354..977282 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:982793..982854 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:983751..983685 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1085526..1085460 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1085789..1085723 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1086020..1085965 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1087008..1086942 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1087310..1087238 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:1088522..1088450 |
K02E7.t1
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1088954..1089016 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1089106..1089178 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1091446..1091381 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1091625..1091556 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1092222..1092150 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1092609..1092667 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1093523..1093461 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1093815..1093745 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1100251..1100182 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:1102130..1102059 |
T13B5.t1
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1102438..1102366 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1107398..1107464 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1107893..1107958 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1108628..1108563 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1120467..1120527 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1182839..1182902 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1298258..1298328 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1331966..1331903 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:1331990..1332061 |
F56D12.t1
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:1333328..1333257 |
F56D12.t2
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1333352..1333413 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1334114..1334054 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:1334138..1334209 |
F56D12.t3
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1335720..1335659 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:1335744..1335815 |
F56D12.t4
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1350586..1350659 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1362629..1362558 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1362944..1362872 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1365759..1365686 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1366203..1366130 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:1366475..1366402 |
F54D12.t1
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1367350..1367423 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1367635..1367707 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:1367947..1368019 |
F54D12.t2
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1368784..1368855 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1474562..1474491 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1474998..1475062 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1475144..1475214 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:1476084..1476012 |
H17B01.t1
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:1476236..1476162 |
H17B01.t2
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1476835..1476768 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1477265..1477197 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1478184..1478118 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:1478762..1478834 |
H17B01.t3
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1479360..1479429 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1480894..1480831 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1481200..1481126 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1481801..1481871 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:1481924..1481996 |
H17B01.t4
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1482614..1482548 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1483006..1482939 |
|
Probable
|
|
|
|
tRNA-Ser-AGA
|
tRNAscan-SE-1.23 |
II:1520041..1520122 |
Y51H7BR.t1
|
|
NR_000812
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1560344..1560275 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1597305..1597377 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1700778..1700706 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:1943344..1943416 |
|
Probable
|
|
|
|
tncR28
|
curated |
II:2034369..2034351 |
|
|
|
Ambros(2003)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2205084..2205015 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2205382..2205313 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2205966..2205900 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2206524..2206592 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2206816..2206884 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2207937..2207864 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2218790..2218721 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2294125..2294068 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2432729..2432790 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2433038..2433099 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2433837..2433903 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2434922..2434993 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2436088..2436025 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2436390..2436324 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2437287..2437358 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2437603..2437665 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2438539..2438609 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2439466..2439531 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2441605..2441677 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:2443052..2443117 |
F42G2.t1
|
Probable
|
|
|
|
mir-72
|
miRNA_Registry5.0 |
II:2452855..2452874 |
F53G2.9
|
|
CEL487595
|
Lau(2001),
Lee(2001),
Lim(2003),
Ambros(2003)
|
|
pre-mir-72
|
miRNA_Registry5.0 |
II:2452855..2452920 |
|
|
|
Lau(2001),
Lee(2001),
Lim(2003),
Ambros(2003)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2457442..2457513 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2457658..2457584 |
|
Probable
|
|
|
|
tncR26
|
curated |
II:2502039..2502058 |
|
|
|
Ambros(2003)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2648431..2648363 |
|
Probable
|
|
|
|
tRNA-Leu-AAG
|
tRNAscan-SE-1.23 |
II:2735875..2735794 |
T05A8.t2
|
|
NR_000822
|
|
|
tRNA-Leu-AAG
|
tRNAscan-SE-1.23 |
II:2736357..2736276 |
T05A8.t1
|
|
NR_000821
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2750814..2750884 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2822280..2822209 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2841775..2841841 |
|
Probable
|
|
|
|
tRNA-Leu-AAG
|
tRNAscan-SE-1.23 |
II:2860341..2860422 |
Y110A2AL.t1
|
|
NR_000823
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2860716..2860787 |
|
Probable
|
|
|
|
tRNA-Leu-AAG
|
tRNAscan-SE-1.23 |
II:2861630..2861549 |
Y110A2AL.t2
|
|
NR_000824
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2862176..2862247 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:2989336..2989267 |
|
Probable
|
|
|
|
tncR32
|
curated |
II:2996402..2996382 |
|
|
|
Ambros(2003)
|
|
tncR29
|
curated |
II:2997057..2997039 |
|
|
|
Ambros(2003)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:3031486..3031414 |
|
Probable
|
|
|
|
tRNA-Gly-GCC
|
tRNAscan-SE-1.23 |
II:3062272..3062202 |
Y25C1A.t2
|
|
NR_000826
|
|
|
tRNA-Gly-GCC
|
tRNAscan-SE-1.23 |
II:3062379..3062449 |
Y25C1A.t1
|
|
NR_000825
|
|
|
tRNA-Ser-AGA
|
tRNAscan-SE-1.23 |
II:3267985..3268066 |
F02E11.t1
|
|
NR_000830
|
|
|
tncR7
|
curated |
II:3305734..3305753 |
|
|
|
Ambros(2003)
|
|
tncR11
|
curated |
II:3306231..3306249 |
|
|
|
Ambros(2003)
|
|
pre-mir-260
|
miRNA_Registry5.0 |
II:3306247..3306317 |
|
|
|
Ambros(2003)
|
|
mir-260
|
miRNA_Registry5.0 |
II:3306298..3306317 |
F39E9.13
|
|
AF024501
|
Ambros(2003)
|
|
tncR10
|
curated |
II:3306363..3306382 |
|
|
|
Ambros(2003)
|
|
tncR9
|
curated |
II:3306466..3306484 |
|
|
|
Ambros(2003)
|
|
tncR7
|
curated |
II:3307465..3307484 |
|
|
|
Ambros(2003)
|
|
tncR8
|
curated |
II:3309250..3309270 |
|
|
|
Ambros(2003)
|
|
tncR7
|
curated |
II:3309984..3310003 |
|
|
|
Ambros(2003)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:3311147..3311085 |
|
Probable
|
|
|
|
tRNA-Thr-AGU
|
tRNAscan-SE-1.23 |
II:3439285..3439214 |
C16C8.t2
|
|
NR_000832
|
|
|
tRNA-Lys-CUU
|
tRNAscan-SE-1.23 |
II:3439461..3439389 |
C16C8.t1
|
|
NR_000831
|
|
|
tRNA-Thr-AGU
|
tRNAscan-SE-1.23 |
II:3519152..3519081 |
W09G10.t3
|
|
NR_000834
|
|
|
tRNA-Lys-CUU
|
tRNAscan-SE-1.23 |
II:3519317..3519245 |
W09G10.t2
|
|
NR_000833
|
|
|
tRNA-His-GUG
|
tRNAscan-SE-1.23 |
II:3521552..3521481 |
W09G10.t1
|
|
NR_000838
|
|
|
tRNA-Thr-AGU
|
tRNAscan-SE-1.23 |
II:3567675..3567604 |
W10G11.t2
|
|
NR_000836
|
|
|
tRNA-Lys-CUU
|
tRNAscan-SE-1.23 |
II:3567830..3567758 |
W10G11.t1
|
|
NR_000835
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:3981015..3980950 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:3981038..3981106 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:4078230..4078299 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:4495238..4495307 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:4565074..4565003 |
|
Probable
|
|
|
|
tRNA-Ala-AGC
|
tRNAscan-SE-1.23 |
II:4565376..4565447 |
M03A1.t1
|
|
NR_000845
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:4928549..4928478 |
|
Probable
|
|
|
|
tRNA-Ile-AAU
|
tRNAscan-SE-1.23 |
II:5032754..5032827 |
F33G12.t1
|
|
NR_000848
|
|
|
tRNA-Ile-AAU
|
tRNAscan-SE-1.23 |
II:5057504..5057431 |
C27A2.t1
|
|
NR_000847
|
|
|
tRNA-Ile-AAU
|
tRNAscan-SE-1.23 |
II:5237838..5237911 |
T16D1.t1
|
|
NR_000849
|
|
|
tRNA-Ala-AGC
|
tRNAscan-SE-1.23 |
II:5292302..5292373 |
ZK622.t1
|
|
NR_000850
|
|
|
tRNA-Glu-CUC
|
tRNAscan-SE-1.23 |
II:5293422..5293493 |
ZK622.t2
|
|
NR_000851
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:5353855..5353787 |
|
Probable
|
|
|
|
sls-2.2
|
curated |
II:5543568..5543677 |
C17C3.16
|
|
U41279
|
|
|
sls-2.3
|
curated |
II:5544243..5544134 |
C17C3.17
|
|
U41279
|
|
|
tRNA-Val-UAC
|
tRNAscan-SE-1.23 |
II:5577242..5577170 |
T25E4.t1
|
|
NR_000853
|
|
|
U18
|
curated |
II:5701628..5701692 |
|
|
Z75111
|
|
|
tRNA-Leu-UAA
|
tRNAscan-SE-1.23 |
II:5772964..5772881 |
F10C1.t2
|
|
NR_000855
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:5782247..5782177 |
|
Probable
|
|
|
|
sls-2.1
|
curated |
II:5844830..5844939 |
ZK1248.18
|
|
U29244
|
|
|
lin-4
|
miRNA_Registry5.0 |
II:5902232..5902252 |
F59G1.6
|
|
NR_000799
|
Lau(2001),
Olsen(1999),
Lim(2003),
Ambros(2003)
|
|
pre-lin-4
|
miRNA_Registry5.0 |
II:5902232..5902291 |
|
|
|
Lau(2001),
Olsen(1999),
Lim(2003),
Ambros(2003)
|
|
pre-mir-261
|
miRNA_Registry5.0 |
II:5969049..5969101 |
|
|
|
Ambros(2003)
|
|
mir-261
|
miRNA_Registry5.0 |
II:5969083..5969101 |
B0034.6
|
|
U23528
|
Ambros(2003)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:6168862..6168930 |
|
Probable
|
|
|
|
mir-60
|
miRNA_Registry5.0 |
II:6328686..6328664 |
C32D5.13
|
|
CEL487584
|
Lau(2001),
Lee(2001),
Lim(2003),
Ambros(2003)
|
|
pre-mir-60
|
miRNA_Registry5.0 |
II:6328725..6328664 |
|
|
|
Lau(2001),
Lee(2001),
Lim(2003),
Ambros(2003)
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:6358385..6358314 |
K10B2.t1
|
Probable
|
|
|
|
tRNA-Lys-UUU
|
tRNAscan-SE-1.23 |
II:6565193..6565265 |
F18C5.t1
|
|
NR_000856
|
|
|
U2
|
WUBLAST2.0 |
II:6716294..6716108 |
|
Probable
|
|
|
|
tRNA-Leu-UAA
|
tRNAscan-SE-1.23 |
II:6721705..6721787 |
T14B4.t1
|
|
NR_000857
|
|
|
tRNA-Leu-UAG
|
tRNAscan-SE-1.23 |
II:6853134..6853215 |
C04A2.t1
|
|
NR_000858
|
|
|
tRNA-Glu-UUC
|
tRNAscan-SE-1.23 |
II:6898123..6898194 |
C44B7.t1
|
|
NR_000859
|
|
|
U1
|
WUBLAST2.0 |
II:6968488..6968325 |
|
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:7001558..7001629 |
C52E12.t1
|
Probable
|
|
|
|
tRNA-Ala-AGC
|
tRNAscan-SE-1.23 |
II:7002995..7002924 |
C52E12.t3
|
|
NR_000862
|
|
|
tRNA-Thr-AGU
|
tRNAscan-SE-1.23 |
II:7003204..7003275 |
C52E12.t2
|
|
NR_000861
|
|
|
mir-236
|
miRNA_Registry5.0 |
II:7030148..7030126 |
C52E12.7
|
|
AY390741
|
Lim(2003),
Ambros(2003),
Grad(2003)
|
|
pre-mir-236
|
miRNA_Registry5.0 |
II:7030190..7030126 |
|
|
|
Lim(2003),
Ambros(2003),
Grad(2003)
|
|
tncR13
|
curated |
II:7122209..7122190 |
|
|
|
Ambros(2003)
|
|
U1
|
WUBLAST2.0 |
II:7171773..7171937 |
|
|
|
|
|
tRNA-Gln-UUG
|
tRNAscan-SE-1.23 |
II:7756941..7756870 |
B0228.t1
|
|
NR_000864
|
|
|
pre-mir-57
|
miRNA_Registry5.0 |
II:7850503..7850443 |
|
|
|
Lau(2001),
Lim(2003)
|
|
mir-57
|
miRNA_Registry5.0 |
II:7850503..7850480 |
T09A5.13
|
|
CEL487581
|
Lau(2001),
Lim(2003)
|
|
pre-mir-85
|
miRNA_Registry5.0 |
II:8393497..8393562 |
|
|
|
Lau(2001),
Lim(2003),
Ambros(2003)
|
|
mir-85
|
miRNA_Registry5.0 |
II:8393539..8393562 |
F49E12.11
|
|
CEL487608
|
Lau(2001),
Lim(2003),
Ambros(2003)
|
|
tRNA-Leu-UAA
|
tRNAscan-SE-1.23 |
II:8631963..8631880 |
T22C8.t1
|
|
NR_000866
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:9058109..9058170 |
|
Probable
|
|
|
|
tRNA-Tyr-GUA
|
tRNAscan-SE-1.23 |
II:9211798..9211715 |
ZK1067.t1
|
|
NR_000867
|
|
|
tncR25
|
curated |
II:9381092..9381111 |
|
|
|
Ambros(2003)
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:9404270..9404344 |
Y51B9A.t1
|
Probable
|
|
|
|
tRNA-Arg-UCG
|
tRNAscan-SE-1.23 |
II:9566152..9566224 |
F35H8.t1
|
|
NR_000871
|
|
|
tRNA-Phe-GAA
|
tRNAscan-SE-1.23 |
II:9713207..9713135 |
Y53C12A.t1
|
|
NR_000873
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:9773565..9773639 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:10004129..10004068 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:10008931..10009002 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:10241032..10241095 |
|
Probable
|
|
|
|
tRNA-Pro-UGG
|
tRNAscan-SE-1.23 |
II:10302140..10302069 |
ZK970.t4
|
|
NR_000880
|
|
|
tRNA-Pro-UGG
|
tRNAscan-SE-1.23 |
II:10302309..10302380 |
ZK970.t1
|
|
NR_000877
|
|
|
tRNA-Pro-UGG
|
tRNAscan-SE-1.23 |
II:10304752..10304681 |
ZK970.t3
|
|
NR_000879
|
|
|
tRNA-Pro-UGG
|
tRNAscan-SE-1.23 |
II:10304921..10304992 |
ZK970.t2
|
|
NR_000878
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:10839327..10839258 |
|
Probable
|
|
|
|
sn2317
|
predicted |
II:10840227..10840301 |
M106.6
|
|
NR_001492
|
Higa(2002)
|
|
tRNA-Lys-CUU
|
tRNAscan-SE-1.23 |
II:11157787..11157715 |
K07C10.t1
|
|
NR_000883
|
|
|
sn2762
|
predicted |
II:11167215..11167129 |
K07C10.2
|
|
NR_001491
|
Higa(2002)
|
|
sn3159
|
predicted |
II:11224088..11224164 |
T06D8.11
|
|
NR_001493
|
Higa(2002)
|
|
tncR6
|
curated |
II:11294969..11294988 |
|
|
|
Ambros(2003)
|
|
tRNA-Ala-UGC
|
tRNAscan-SE-1.23 |
II:11333990..11333919 |
B0491.t2
|
|
NR_000885
|
|
|
tRNA-Ala-UGC
|
tRNAscan-SE-1.23 |
II:11334414..11334485 |
B0491.t1
|
|
NR_000884
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:11441095..11441169 |
VW02B12L.t1
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:11442229..11442155 |
VW02B12L.t2
|
Probable
|
|
|
|
pre-mir-252
|
miRNA_Registry5.0 |
II:11446844..11446783 |
|
|
|
Lim(2003)
|
|
mir-252
|
miRNA_Registry5.0 |
II:11446844..11446822 |
W02B12.14
|
|
AY390758
|
Lim(2003)
|
|
sn1185
|
predicted |
II:11484657..11484588 |
B0334.12
|
|
NR_001490
|
Higa(2002)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:11518831..11518765 |
|
Probable
|
|
|
|
pre-mir-35
|
miRNA_Registry5.0 |
II:11537534..11537594 |
|
|
|
Lau(2001),
Lim(2003),
Ambros(2003)
|
|
mir-35
|
miRNA_Registry5.0 |
II:11537573..11537594 |
D1007.17
|
|
CEL487559
|
Lau(2001),
Lim(2003),
Ambros(2003)
|
|
pre-mir-36
|
miRNA_Registry5.0 |
II:11537637..11537699 |
|
|
|
Lau(2001),
Lim(2003)
|
|
mir-36
|
miRNA_Registry5.0 |
II:11537678..11537699 |
Y23B4A.3
|
|
CEL487560
|
Lau(2001),
Lim(2003)
|
|
pre-mir-37
|
miRNA_Registry5.0 |
II:11537759..11537819 |
|
|
|
Lau(2001),
Lim(2003),
Ambros(2003)
|
|
mir-37
|
miRNA_Registry5.0 |
II:11537798..11537819 |
Y62F5A.4
|
|
CEL487561
|
Lau(2001),
Lim(2003),
Ambros(2003)
|
|
pre-mir-38
|
miRNA_Registry5.0 |
II:11537854..11537916 |
|
|
|
Lau(2001),
Lim(2003),
Ambros(2003)
|
|
mir-38
|
miRNA_Registry5.0 |
II:11537895..11537916 |
Y62F5A.5
|
|
CEL487562
|
Lau(2001),
Lim(2003),
Ambros(2003)
|
|
pre-mir-39
|
miRNA_Registry5.0 |
II:11538008..11538069 |
|
|
|
Lau(2001),
Lim(2003)
|
|
mir-39
|
miRNA_Registry5.0 |
II:11538048..11538069 |
F54B11.12
|
|
CEL487564
|
Lau(2001),
Lim(2003)
|
|
pre-mir-40
|
miRNA_Registry5.0 |
II:11538104..11538165 |
|
|
|
Lau(2001),
Lim(2003),
Ambros(2003)
|
|
mir-40
|
miRNA_Registry5.0 |
II:11538144..11538165 |
Y62F5A.7
|
|
CEL487565
|
Lau(2001),
Lim(2003),
Ambros(2003)
|
|
pre-mir-41
|
miRNA_Registry5.0 |
II:11538229..11538294 |
|
|
|
Lau(2001),
Lim(2003)
|
|
mir-41
|
miRNA_Registry5.0 |
II:11538273..11538294 |
Y62F5A.8
|
|
CEL487563
|
Lau(2001),
Lim(2003)
|
|
pre-mir-355
|
miRNA_Registry5.0 |
II:11833528..11833469 |
|
|
|
Ohler(2004)
|
|
mir-355
|
miRNA_Registry5.0 |
II:11833528..11833508 |
T27D12.5
|
|
Z70037
|
Ohler(2004)
|
|
mir-45
|
miRNA_Registry5.0 |
II:11880883..11880863 |
ZK930.11
|
|
CEL487569
|
Lau(2001),
Lim(2003),
Ambros(2003)
|
|
pre-mir-45
|
miRNA_Registry5.0 |
II:11880929..11880863 |
|
|
|
Lau(2001),
Lim(2003),
Ambros(2003)
|
|
pre-mir-42
|
miRNA_Registry5.0 |
II:11889728..11889794 |
|
|
|
Lau(2001),
Lee(2001),
Lim(2003),
Ambros(2003)
|
|
mir-42
|
miRNA_Registry5.0 |
II:11889775..11889794 |
ZK930.8
|
|
CEL487566
|
Lau(2001),
Lee(2001),
Lim(2003),
Ambros(2003)
|
|
pre-mir-43
|
miRNA_Registry5.0 |
II:11889834..11889896 |
|
|
|
Lau(2001),
Lee(2001),
Lim(2003),
Ambros(2003)
|
|
mir-43
|
miRNA_Registry5.0 |
II:11889874..11889896 |
ZK930.9
|
|
CEL487567
|
Lau(2001),
Lee(2001),
Lim(2003),
Ambros(2003)
|
|
pre-mir-44
|
miRNA_Registry5.0 |
II:11889942..11890007 |
|
|
|
Lau(2001),
Lim(2003),
Ambros(2003)
|
|
mir-44
|
miRNA_Registry5.0 |
II:11889987..11890007 |
ZK930.10
|
|
CEL487568
|
Lau(2001),
Lim(2003),
Ambros(2003)
|
|
tRNA-Val-UAC
|
tRNAscan-SE-1.23 |
II:11959279..11959351 |
W03C9.t1
|
|
NR_000888
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:12345853..12345783 |
C44C11.t1
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:12346240..12346172 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:12346707..12346639 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:12349610..12349539 |
C44C11.t2
|
Probable
|
|
|
|
tRNA-Ile-AAU
|
tRNAscan-SE-1.23 |
II:12362352..12362425 |
Y57A10B.t1
|
|
NR_000889
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:12365226..12365157 |
|
Probable
|
|
|
|
tRNA-Met-CAU
|
tRNAscan-SE-1.23 |
II:12435554..12435483 |
Y57A10C.t1
|
|
NR_000891
|
|
|
tRNA-Ile-AAU
|
tRNAscan-SE-1.23 |
II:12494644..12494717 |
T21B4.t1
|
|
NR_000890
|
|
|
pre-mir-77
|
miRNA_Registry5.0 |
II:12519194..12519253 |
|
|
|
Lau(2001),
Lim(2003)
|
|
mir-77
|
miRNA_Registry5.0 |
II:12519232..12519253 |
T21B4.13
|
|
CEL487600
|
Lau(2001),
Lim(2003)
|
|
tRNA-Trp-CCA
|
tRNAscan-SE-1.23 |
II:12539500..12539571 |
F49C5.t1
|
|
NR_000892
|
|
|
tRNA-Lys-UUU
|
tRNAscan-SE-1.23 |
II:12541663..12541591 |
F49C5.t4
|
|
NR_000895
|
|
|
tRNA-Leu-AAG
|
tRNAscan-SE-1.23 |
II:12541914..12541833 |
F49C5.t3
|
|
NR_000894
|
|
|
tRNA-Ala-AGC
|
tRNAscan-SE-1.23 |
II:12542537..12542608 |
F49C5.t2
|
|
NR_000893
|
|
|
pre-mir-267
|
miRNA_Registry5.0 |
II:12638111..12638049 |
|
|
|
Grad(2003)
|
|
mir-267
|
miRNA_Registry5.0 |
II:12638111..12638092 |
Y38E10A.27
|
|
AL110484
|
Grad(2003)
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:12666130..12666059 |
Y38E10A.t3
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:12667762..12667690 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:12669966..12669894 |
Y38E10A.t2
|
Probable
|
|
|
|
tRNA-Ala-UGC
|
tRNAscan-SE-1.23 |
II:12678211..12678282 |
Y38E10A.t1
|
|
NR_000896
|
|
|
tRNA-Arg-CCG
|
tRNAscan-SE-1.23 |
II:12728722..12728651 |
|
|
|
|
|
U1-8
|
curated |
II:12944864..12944700 |
F58G1.10
|
|
NR_000900
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:13658507..13658579 |
|
Probable
|
|
|
|
U2-17
|
curated |
II:13717649..13717463 |
Y54G9A.8
|
|
NR_000902
|
|
|
U2-4
|
curated |
II:13829388..13829202 |
F08G2.10
|
|
NR_000904
|
Thomas(1990)
|
|
U2-3
|
curated |
II:13836015..13835831 |
F08G2.9
|
|
NR_000903
|
Thomas(1990)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:13849053..13849122 |
|
Probable
|
|
|
|
U2-12
|
curated |
II:13852681..13852867 |
F08G2.11
|
|
NR_000905
|
|
|
U2-6
|
curated |
II:13949050..13948864 |
W07G1.9
|
|
NR_000908
|
Thomas(1990)
|
|
U2-5
|
curated |
II:13951314..13951500 |
W07G1.8
|
|
NR_000907
|
Thomas(1990)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:14409484..14409406 |
|
Probable
|
|
|
|
mir-234
|
miRNA_Registry5.0 |
II:14466189..14466169 |
C13B4.3
|
|
AY390739
|
Lim(2003),
Ambros(2003)
|
|
pre-mir-234
|
miRNA_Registry5.0 |
II:14466234..14466169 |
|
|
|
Lim(2003),
Ambros(2003)
|
|
tRNA-Gln-UUG
|
tRNAscan-SE-1.23 |
II:14474804..14474733 |
C13B4.t1
|
|
NR_000911
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
II:14616972..14617041 |
F19H8.t1
|
Probable
|
|
|
|
tRNA-Leu-AAG
|
tRNAscan-SE-1.23 |
II:14635307..14635226 |
C38C6.t1
|
|
NR_000914
|
|
|
pre-mir-273
|
miRNA_Registry5.0 |
II:14946946..14947006 |
|
|
|
Grad(2003)
|
|
mir-273
|
miRNA_Registry5.0 |
II:14946987..14947006 |
E01F3.2
|
|
Z93376
|
Grad(2003)
|
|
tncR20
|
curated |
II:15043240..15043260 |
|
|
|
Ambros(2003)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
II:15180811..15180742 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:53902..53974 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:58929..59001 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:105846..105774 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:106618..106546 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:110754..110682 |
|
Probable
|
|
|
|
tncR17
|
curated |
III:178875..178894 |
|
|
|
Ambros(2003)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:265327..265257 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:277153..277083 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:302709..302781 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:385876..385818 |
|
Probable
|
|
|
|
sn1502
|
predicted |
III:502801..502887 |
F30H5.4
|
|
NR_001469
|
Higa(2002)
|
|
tRNA-Tyr-GUA
|
tRNAscan-SE-1.23 |
III:535380..535463 |
T22F7.t1
|
|
NR_000192
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:629127..629055 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:760205..760144 |
|
Probable
|
|
|
|
cer-6
|
curated |
III:794393..794520 |
B0412.6
|
|
AB125755
|
Wachi(2004)
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:979056..978988 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:1009193..1009128 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:1032051..1031982 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:1032334..1032265 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:1032625..1032556 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:1033776..1033707 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
III:1040664..1040734 |
BE0003N10.t1
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:1040957..1041025 |
|
Probable
|
|
|
|
tRNA-pseudo
|
WUBLAST2.0 |
III:1041249..1041318 |
|
Probable
|
|
|
|
tRNA-pseudo
|
tRNAscan-SE-1.23 |
III:1041541..1041611 |
|